Toronto (49-18) has won its last seven dating back to before the hiatus and three straight games since the restart.
The Magic (32-37) missed an opportunity to clinch a playoff spot following Washington's loss to Philadelphia earlier Wednesday. But they maintained their 7 1/2-game lead over the Wizards for the eighth seed with four seeding games to play.
They also may be without forward Aaron Gordon for an undetermined amount of time after he left the game in the third quarter with a left hamstring injury after taking a hard foul from Lowry.
Gordon was going up for a dunk and was hit on the arm as Lowry went to strip the ball. Gordon's left leg extended high in the air before he crashed to the floor and immediately reached for his left hamstring. He was able to shoot the ensuing free throws but then struggled to run down the court. He went to the locker room on the next timeout.
Lowry received a Flagrant 1 foul after a review by officials. Gordon had nine points and 11 rebounds at the time of his injury.
Despite Gordon's exit, the Magic cut into the Raptors' 20-point halftime lead, trimming it to 78-71 in the opening minute of the fourth quarter.
But that would be as close as they would get to rest of the way.
The Raptors spaced the floor well early, building a 24-8 lead in the opening period. They also were active on the defensive end, limiting Orlando to 5-of-20 shooting (0 for 9 from 3-point line). Orlando finished the quarter with 11 points, a season low by a Toronto opponent.
Toronto carried its momentum into the second quarter, taking a 51-30 lead late on the second of back-to-back 3-pointers by Lowry. The Raptors held a 55-35 advantage at halftime.
Magic: The 35 points they scored in the first half were a low for any half this season. . Michael Carter-Williams sat with a sore left foot.
Raptors: Play Celtics on Friday.
Magic: Play 76ers on Friday.
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